Showing posts with label Hypothesis. Show all posts
Showing posts with label Hypothesis. Show all posts

Wednesday, 5 September 2018

Spotlight on Annotation for Transparent Inquiry - finalist for 2018 ALPSP Awards for Innovation in Publishing

On 13 September we will be announcing the winner of the 2018 ALPSP Awards for Innovation in Publishing, sponsored by MPS Limited, at the annual ALPSP Conference.  In this series of posts leading up to the Awards ceremony we meet our six finalists and get to know a bit more about them.


In this blog, we speak to Nisha Doshi, Senior Digital Development Publisher at Cambridge University Press, Heather Staines, Director of Partnerships at Hypothesis and Sebastian Karcher, Associate Director of the Qualitative Data Repository.


Tell us a bit about your company


One of the things that makes Annotation for Transparent Inquiry unique is that it isn’t the product of one company but the result of a collaboration between three non-profit, mission-driven organizations: Cambridge University Press, Hypothesis and the Qualitative Data Repository (QDR).

Cambridge University Press dates from 1534 and is part of the University of Cambridge; our mission is to unlock people's potential with the best learning and research solutions and we published the first articles that make use of Annotation for Transparent Inquiry (ATI). 

Hypothesis is a non-profit open source technology company, and they provide the annotation tool that powers ATI. 

QDR is a domain repository dedicated to curating, preserving and publishing the data underlying qualitative and multi-method research in the health and social sciences. 


What is the project/product that you submitted for the Awards?


We submitted Annotation for Transparent Inquiry (ATI), which creates a digital overlay on top of content on publisher web pages and connects specific passages of text to author-generated annotations. The ATI annotations include ‘analytic notes’ discussing data generation and analysis, excerpts from data sources, and links to those sources stored in trusted digital repositories. These data sources can be interview transcripts, audio clips, scanned telegrams, maps and so forth – all sorts of different types of material which wouldn’t usually be accessible to the reader. Readers are able to view annotations immediately alongside the main text, removing the need to jump to footnotes or separate appendices.


Tell us more about how it works and the team behind it


A passage of the article is highlighted to indicate there’s an annotation, and the annotations are displayed as a collapsible right-hand panel alongside the content. Each annotation created by the author generates a unique persistent web address for the details and analysis shared with the reader. The passage in the publication is linked to the source material, which is archived by QDR – a trusted digital repository. Readers can also shift into an Activity Page where they can view, search, and filter all of the annotations created on the project. From this page, researchers can explore other portions of the content as well as connected resources.


graphic Annotation for Transparent Inquiry


ATI has been a collaborative effort both within and between our three organisations. At Cambridge University Press, launch of ATI has involved colleagues in editorial, digital publishing, the Cambridge Core platform team and marketing, to name but a few. 

At Hypothesis, with our dedication to supporting researcher workflow through open annotation, input and technical expertise has come from partnerships, marketing, and product development.

And at QDR, transparency in qualitative research is central to our mission and ATI involves the whole team. QDR is run by active researchers, who conceptualized ATI based on ongoing debates in qualitative methods. The repository’s curators provide advice and support to researchers interested in using QDR.


Why do you think it demonstrates publishing innovation?


Recent years have seen significant advances in transparency and reproducibility for quantitative analyses, but progress has much slower for the qualitative analyses central to so much research. ATI brings transparency to qualitative research. ATI allows readers to interrogate qualitative sources in a way that has not hitherto been possible without, for example, travelling to archives or museums to access the original material themselves. It also allows readers to understand authors’ analytic processes in depth, verify their evidence and thus properly evaluate their findings. By utilizing an annotation layer, authors are no longer constrained by word limits and thus can elaborate on aspects of the project which are important to them, providing rich media and additional links as needed.


What are your plans for the future?


We originally launched ATI in April 2018 with eight articles published by Cambridge University Press, followed by a 9th article published in May. We are now working to integrate ATI with books published by Cambridge, as well as material from other publishers and preprint servers. Although ATI was launched by Cambridge University Press, Hypothesis and QDR, it makes use of open standards and open source technology and the aspiration is that it can go on to be used by different publishers, different annotation tools and/or different data repositories. For example, a further eight articles with annotations on five other publishing platforms are pending publication. The founding partners of ATI are also exploring how best to embed ATI upstream in the research and authoring process.

Lastly (for now), to further promote ATI and explore how authors will conduct research and write with these annotations in mind, QDR launched the “ATI Challenge”. The winners receive an honorarium to help them finalize their manuscript with ATI annotations and, from our point of view, working with those authors in a variety of disciplines and understanding how they want to use ATI will help us further improve workflows, instructions and technology. QDR received more than 80 applications across disciplines in the humanities, social sciences and STM and from across five continents and announced the winning proposals in early August. We believe that the wealth and quality of applications to the ATI challenge shows that Annotation for Transparent Inquiry really does serve a need recognized by qualitative researchers worldwide.




photo Nisha Doshi
Nisha Doshi is Senior Digital Development Publisher at Cambridge University Press, where she leads the digital publishing team across academic books and journals.

@CambridgeUP
@nishadoshi






photo Heather Staines

Heather Staines is Director of Partnerships at Hypothesis, working with publishers, platforms and technology companies to integrate annotation into their workflow.

@heatherstaines
@hypothes_is




photo Sebastian Karcher

Sebastian Karcher is the Associate Director of the Qualitative Data Repository, where his work focuses on data curation and technological strategy.

@adam42smith
@qdrepository






https://qdr.syr.edu/ati
https://www.cambridge.org/core/services/authors/annotation-for-transparent-inquiry-ati
https://qdr.syr.edu/ati/ati-challenge

The ALPSP Annual Conference and Awards 2018 will be held at the Beaumont Estate, Old Windsor, UK from 12-14 September. #alpsp18

Wednesday, 16 May 2018

Open Annotation for Researchers and Publishers

Hypothesis Logo

This month's Featured Member - Hypothesis provides our latest Guest Blog, penned by their Director of Partnerships - Heather Staines.


Created as a nonprofit, based on open source technology, Hypothesis is an independent industry voice that listens to community partners, not shareholders, to create a solution that serves researchers through all stages of their workflow. Our 145,000 users have already created more than 3.1 million annotations in the research, education, and journalism sectors. In 2015, we launched the Annotating All Knowledge Coalition, for publishers, universities, and technology companies wishing to explore interoperable annotation. Free to join, the AAK Coalition invites ALPSP members to learn more. We also host I Annotate, the world’s largest conference dedicated to annotation technologies, now in its sixth year. Join us in San Francisco on June 6–7 2018.

Workflow tools that silo content and data and require researchers to cut and paste notes or reenter information result in frustration and loss of productivity. Visit Hypothesis to create a free account that you can use to annotate content across the web. Deep-linking through annotation creates unique persistent web addresses for content at any level: page, paragraph, sentence, word, or data object across HTML, PDF, and EPUB formats. Embed Hypothesis on your website or platform with just a short piece of javascript code to enable anyone to annotate — whether they have the browser plugin already or not. If you want more control over annotations, consider our Publisher Group functionality.

With the successful launch of the first Publisher Group for eLife in January, 2018, we are pleased to announce further refined group technology for publishers, platforms, and societies.  Publisher Groups are branded and moderated annotation layers that enable conversations, the creation of additional content, private note-taking, and private collaboration groups over publisher versions of record. Increase reader engagement with interaction on your content through annotations, which also populate to your publisher group page.

Publisher Groups enable world-readable annotation layers that are open for anyone to create annotations or are restricted to authors, members, or invited experts. Society publishers can establish a group that spans both their content site and their member site to create a cohesive conversation to benefit members. Societies with similar interests can collaborate to create a discipline-specific layer that spans multiple content sites. The W3C standards-based Hypothesis client can connect to existing account systems to avoid the need for users to create separate accounts, and it can be configured to match the styling of publisher websites and platforms. Hypothesis works with all of the popular hosting solutions across the industry.

Annotations in groups can also be explored through activity pages, giving publishers and societies quick snapshots into annotation activity on specific sites and documents. Full analytics on public annotations and aggregated anonymized data on private and group annotations are available through Hypothesis' robust API. Public annotations are included in the Crossref Event Data project for indexing by Google.

Publishers are discovering additional use cases for annotation every day. eJournal Press has integrated Hypothesis with its peer review dashboard to offer reviewers the option to provide feedback through inline annotation. Discussions with all major manuscript submissions systems are underway. Taking the popular SciBot account functionality as a model, publishers are exploring annotation technology to connect external data to specific identifiers already embedded in their content. SciBot searches papers for RRIDs (Research Resource Identifiers) — key for reproducibility and used by more than 125 journals — then displays information on each RRID in the form of an annotation card on the publisher site. Readers no longer need to navigate away to see the data behind the identifier. The Qualitative Data Repository at Syracuse University has partnered with Cambridge University Press to connect citations to their sources and underlying data through Annotation for Transparent Inquiry, an innovation that puts quotes and sources in context with author notes. Production departments are using annotation to handle questions on thier xml staging sites or in editorial processes to plan journal migrations. Preprint services such as bioRxiv are considering making society groups visible by default on top of their servers. The possibilities are endless.

Let's talk about how annotation and Publisher Group options can serve your goals for publication and user engagement.

Photo of Heather Staines

Heather Staines is Director of Partnerships for Hypothesis, working with publishers, platforms, and technology partners to promote open annotation. She has worked at Proquest, SIPX, Springer SBM (now Springer Nature), and Praeger Publishers, and she is active in many industry associations and task forces, including ALPSP, SSP, STM, Charleston, Force11, and more.


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